PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_03267
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 190aa    MW: 21163.1 Da    PI: 7.6603
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_03267genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.35.9e-212170255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g
  PEQU_03267 21 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 70
                7********.**********7.....337************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.0E-142170IPR001471AP2/ERF domain
PROSITE profilePS5103225.7522178IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-332179IPR001471AP2/ERF domain
SuperFamilySSF541715.3E-232179IPR016177DNA-binding domain
SMARTSM003801.1E-372184IPR001471AP2/ERF domain
PRINTSPR003673.2E-122233IPR001471AP2/ERF domain
CDDcd000181.31E-152980No hitNo description
PRINTSPR003673.2E-124460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
PSTHEQTPSS QTEIEGQPRR RYRGVRQRPW GKWAAEIRDP HKAARVWLGT FDTAEAAARA  60
YDEAALRFRG SRAKLNFPEN ARLQPPEIDS SGQSITPDLS ASRDYLEYSR LLRGDGQYAN  120
LEYSRLNSAS PVSSSSTSSS SSSVLNRFYG MGGEEEQRMR YLGQSEIWGT AFPANKWEDS  180
GELPPPSSSG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A2e-242078463ATERF1
2gcc_A2e-242078463ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009408302.12e-45PREDICTED: ethylene-responsive transcription factor ERF113-like
RefseqXP_009411924.11e-44PREDICTED: ethylene-responsive transcription factor ABR1-like
TrEMBLM0TNK34e-44M0TNK3_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr8P08000_0011e-43(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP98942540
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.15e-16ethylene response factor 110